tag:blogger.com,1999:blog-7233518910685295571.post8359994786318209615..comments2023-05-11T06:21:18.796-07:00Comments on avrilomics: Installing GeneWise - Wise2.4.1Avril Coghlanhttp://www.blogger.com/profile/14064447050845166903noreply@blogger.comBlogger1125tag:blogger.com,1999:blog-7233518910685295571.post-64615365349819900122013-05-16T04:59:50.161-07:002013-05-16T04:59:50.161-07:00I start getting error messages from this point on....I start getting error messages from this point on. I'm using Mac OSX 10.6.8 and Xcode 3.2.6. Any idea how I can sort this out ... I do not see subseqhash.o in dynlibsrc/<br /><br />if test -x /usr/bin/ranlib; then /usr/bin/ranlib libdyna.a; else exit 0; fi<br />(cd dynlibsrc ; make CC="gcc" CFLAGS="-c -O3 `glib-config --cflags`" libdyna_glib.a )<br />/bin/sh: glib-config: command not found<br />gcc -c -O3 -I../base/ subseqhash.c<br />In file included from subseqhash.c:4:<br />subseqhash.h:9:18: error: glib.h: No such file or directory<br />In file included from subseqhash.c:4:<br />subseqhash.h:87: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘Wise2_remove_subseq_SeqLookupPos’<br />subseqhash.dy: In function ‘Wise2_new_ghash_SeqLookupInterface’:<br />subseqhash.dy:30: error: ‘g_direct_hash’ undeclared (first use in this function)<br />subseqhash.dy:30: error: (Each undeclared identifier is reported only once<br />subseqhash.dy:30: error: for each function it appears in.)<br />subseqhash.dy:30: error: ‘g_direct_equal’ undeclared (first use in this function)<br />subseqhash.dy:30: warning: cast to pointer from integer of different size<br />subseqhash.dy: In function ‘Wise2_get_client_subseqhash_ghash’:<br />subseqhash.dy:46: error: ‘GHashTable’ undeclared (first use in this function)<br />subseqhash.dy:46: error: ‘t’ undeclared (first use in this function)<br />subseqhash.dy:46: error: expected expression before ‘)’ token<br />subseqhash.dy: In function ‘Wise2_free_subseqhash_ghash’:<br />subseqhash.dy:74: error: ‘GHashTable’ undeclared (first use in this function)<br />subseqhash.dy:74: error: ‘h’ undeclared (first use in this function)<br />subseqhash.dy:76: error: expected expression before ‘)’ token<br />subseqhash.dy:78: error: ‘Wise2_remove_subseq_SeqLookupPos’ undeclared (first use in this function)<br />subseqhash.dy: At top level:<br />subseqhash.dy:87: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘Wise2_remove_subseq_SeqLookupPos’<br />subseqhash.dy: In function ‘Wise2_is_populated_subseqhash_ghash’:<br />subseqhash.dy:105: error: ‘GHashTable’ undeclared (first use in this function)<br />subseqhash.dy:105: error: ‘h’ undeclared (first use in this function)<br />subseqhash.dy:107: error: expected expression before ‘)’ token<br />subseqhash.dy:111: error: ‘gconstpointer’ undeclared (first use in this function)<br />subseqhash.dy:111: error: expected ‘)’ before ‘seq_number’<br />subseqhash.dy:111: warning: comparison between pointer and integer<br />subseqhash.dy: In function ‘Wise2_lookup_subseqhash_ghash’:<br />subseqhash.dy:124: error: ‘GHashTable’ undeclared (first use in this function)<br />subseqhash.dy:124: error: ‘h’ undeclared (first use in this function)<br />subseqhash.dy:126: error: expected expression before ‘)’ token<br /><br />make[1]: *** [subseqhash.o] Error 1<br />make: *** [realall] Error 2Josephhttps://www.blogger.com/profile/12928599109170468657noreply@blogger.com